Science and Engineering of Natural Systems group
Electronics and Computer Science (FPAS)
- Web page
- http://www.sense.ecs.soton.ac.uk/
The Science and Engineering of Natural Systems (SENSe) group exploits the interface between technology and biology. It undertakes fundamental research into the science and engineering of computational methods that can further our understanding of biological and other natural systems, and also into the development and application of novel computational systems and techniques that are inspired by nature.
Head of group
Selected members with computational interest
Selected computational projects
Adding social ties to the Schelling model
Seth Bullock, Sally Brailsford (Investigators), Elisabeth zu-Erbach-Schoenberg
The Schelling model is an abstract model for segregation in
a spatially arranged population. We extended the traditional model by the addition of a dynamic social network. The social network influences the spatial dynamics of agents moving on the grid by changing the agents’ evaluation of their neighbourhood. In turn, the spatial arrangement influences the change of the social network.
Amorphous Computation, Random Graphs and Complex Biological Networks
Seth Bullock (Investigator)
This interdisciplinary research collaboration arose within the Simple Models of Complex Networks research cluster funded by the EPSRC www.epsrca.ac.uk through the Novel Computation Initiative. Here, leading groups from the Universities of Leeds, Sheffield, Nottingham, Southampton, Royal Holloway and King’s College and industrial partners BT are brought together for the first time to develop novel amorphous computation methods based on the theory of random graphs.
An Investigation into the Cascade Effect of Mergers on the Global Financial Markets
Seth Bullock, Antonella Ianni (Investigators), Camillia Zedan
An investigation into the external effects that horizontal mergers have on the interconnected global markets.
Cellular Automata Modelling of Membrane Formation and Protocell Evolution
Seth Bullock (Investigator), Stuart Bartlett
We simulated the meso-level behaviour of lipid-like particles in a range of chemical and physical environments. Self-organised protocellular structures can be shown to emerge spontaneously in systems with random, homogeneous initial conditions. Introducing an additional 'toxic' particle species and an associated set of synthesis reactions produced a new set of ecological behaviours compared to the original model of Ono and Ikegami.
Complex Systems Simulations Centre for Doctoral Training
Jonathan Essex, Seth Bullock, Hans Fangohr (Investigators)
The centre for doctoral training brings together students from a variety of backgrounds, ranging from mathematics, physics and chemistry to oceanography, geography, biology, computer science, and engineering. Students carry out a four-year programme combining taught courses with a PhD project.
Fracturing of small social networks
Seth Bullock, Sally Brailsford (Investigators), Elisabeth zu-Erbach-Schoenberg
A connected social network is a very important factor for the success of groups and organisations. We investigate which factors make a group more resistant to the effects of disagreements which commonly happen in small social networks.
Lagrangian modelling of ecosystem dynamics at the Bermuda Atlantic Time-series Study station
Tom Anderson, Seth Bullock (Investigators), Melissa Saeland
Focus in the marine ecosystem modelling community is starting to shift towards the use of Lagrangian, agent-based models as these are believed to produce more realistic results. The basic assumptions behind these models have not been thoroughly tested, and this project aims to undertake a detailed study of Lagrangian marine ecosystem models, before creating one to investigate the dynamics at the Bermuda Atlantic Time-series Study station (BATS).
Reconstructing past lake conditions using sediment cores
Seth Bullock
Lake sediments can be analysed for the reconstruction of past environmental conditions, and past abundances of different species. These data are the first step in the creation of a simulation model which will investigate the dramatic fluctuations in environmental conditions in the East African Rift Valley soda lakes.
Selection pressure for language and theory-of-mind in monkeys
Jason Noble (Investigator)
To what extent are the alarm calls of putty-nosed monkeys likely to be a good model for human language evolution? Simulation is used to classify evolutionary trajectories as either plausible or implausible, and to put lower bounds on the cognitive complexity required to perform particular behaviours.
Separation of timescales in models of complex networks
Seth Bullock (Investigator), Elisabeth zu-Erbach-Schoenberg, Connor McCabe
In many real-world systems several processes act on the system state. The way these processes interact can have implications for the resulting system state. We investigate how separation of the timescales of two processes influences the system's equilibrium state.
Simulation modelling of habitat permeability for mammalian wildlife
Patrick Doncaster, Jason Noble (Investigators), Angela Watkins
Using and integrating least-cost models and agent-based simulations to explore the way in which mammals interact with, and hence move, through fragmented landscapes.
Spatial Mobility in the Formation of Agent-Based Economic Networks
Antonella Ianni, Seth Bullock (Investigators), Camillia Zedan
An investigation into the effect of spatial mobility on endogenous economic network formation.
Spatially Embedded Complex Systems Engineering
Seth Bullock (Investigator)
SECSE brought together an interdisciplinary team of scientists working on an ambitious three-and-a-half year project titled. The research cluster spanned neuroscience, artificial intelligence, geography, and complex systems in an attempt to understand the role of spatial organization and spatial processes in complex networks within the domains of neural control, geo-information systems and distributed IT systems such as those implicated in air-traffic control.
The Endogenous Formation of Economic Networks
Antonella Ianni, Seth Bullock (Investigators), Camillia Zedan
An investigation into endogenous network formation using a simple agent-based approach.
The Origins of Communication Revisited
Jason Noble (Investigator), Jordi Arranz
Quinn (2001) sought to demonstrate that communication be- tween simulated agents could be evolved without pre-defined communication channels. Quinn’s work was exciting because it showed the potential for ALife models to look at the real origin of communication; however, the work has never been replicated. In order to test the generality of Quinn’s result we use a similar task but a completely different agent architecture. We find that qualitatively similar behaviours emerge, but it is not clear whether they are genuinely communicative. We extend Quinn’s work by adding perceptual noise and internal state to the agents in order to promote ritualization of the nascent signal. Results were inconclusive; philosophical implications are discussed.
The Role of Information in Price Discovery
Antonella Ianni, Seth Bullock (Investigators), Camillia Zedan
The recent economic crisis has highlighted a continued vulnerability and lack of understanding in the financial markets. In order to overcome this, many believe that current market models must be improved. Recently, a trend towards agent-based modelling has emerged. Viewing the economy as a complex system is beginning to be seen as key to explaining certain market characteristics that were originally considered anomalies.
One of the fundamental assumptions in economics is that of information efficiency: that the price of a stock reflects its worth, that all possible information about a security is publicly known, and that any changes to price take place instantaneously. In reality, however, this is not the case.
This project considers the use of agents in modelling economic systems and demonstrates the effect of information levels on price discovery using a simple market simulation.










