Computational Modelling Group

Neuroscience

Neuroscience is an interdisciplinary science that studies the nervous system. Neuroscience projects range from electrophysiology on single nerve cells to complex biological and physcological interactions. More information on the breadth of Neuroscience activities at the Univseristy of Southampton can be found at the Southampton Neuroscience Group (SoNG) homepage: http://www.southampton.ac.uk/song/.

For queries about this topic, contact Richard Edwards.

View the calendar of events relating to this topic.

Projects

Amorphous Computation, Random Graphs and Complex Biological Networks

Seth Bullock (Investigator)

This interdisciplinary research collaboration arose within the Simple Models of Complex Networks research cluster funded by the EPSRC www.epsrca.ac.uk through the Novel Computation Initiative. Here, leading groups from the Universities of Leeds, Sheffield, Nottingham, Southampton, Royal Holloway and King’s College and industrial partners BT are brought together for the first time to develop novel amorphous computation methods based on the theory of random graphs.

Bioinformatic identification and physiological analysis of ethanol-related genes in C. elegans

Richard Edwards, Vincent O'Connor, Lindy Holden-Dye (Investigators), Ben Ient

Investigating the broad molecular, cellular and systems level impacts of acute and chronic ethanol in the nematode, Caenorhabditis elegans, as a model.

Modelling neuronal activity at the knee joint

Mark Taylor, Tiina Roose (Investigators), Gwen Palmer

The function of the knee joint is reliant on proprioception, which involves the response of nerve endings in the tissues at the joint. This project will be concentrating on the neuronal activity, caused by mechanical stimuli, of the more common receptors found at the knee (Ruffini, Paciniform, Golgi and Nociceptor).

There are three stages to this project:
1. Modelling the behaviour of each individual receptor, with the use of the Hodgkin-Huxley model [1].
2. These models will then be applied to the soft tissues around a knee, where a global deformation of the tissue will result in local stimulation of receptors.
3. The soft tissue models will then be applied to structures in the knee.

[1] - Hodgkin, A.L. and A.F. Huxley, A quantitative description of membrane current and its application to conduction and excitation in nerve. Journal of Physiology, 1952. 117: p. 500-544.

Multiscale Modelling of Electrochemical Processes in Neurons

John Chad (Investigator), Stuart George

Using asymptotic expansions to determine how the signalling behaviour of neurons is related to their microstructure.

Spatially Embedded Complex Systems Engineering

Seth Bullock (Investigator)

SECSE brought together an interdisciplinary team of scientists working on an ambitious three-and-a-half year project titled. The research cluster spanned neuroscience, artificial intelligence, geography, and complex systems in an attempt to understand the role of spatial organization and spatial processes in complex networks within the domains of neural control, geo-information systems and distributed IT systems such as those implicated in air-traffic control.

µ-VIS Computed Tomography Centre

Ian Sinclair, Richard Boardman, Dmitry Grinev, Philipp Thurner, Simon Cox, Jeremy Frey, Mark Spearing, Kenji Takeda (Investigators)

A dedicated centre for computed tomography (CT) at Southampton, providing complete support for 3D imaging science, serving Engineering, Biomedical, Environmental and Archaeological Sciences. The centre encompasses five complementary scanning systems supporting resolutions down to 200nm and imaging volumes in excess of one metre: from a matchstick to a tree trunk, from an ant's wing to a gas turbine blade.

People

Seth Bullock
Professor, Electronics and Computer Science (FPAS)
Simon Cox
Professor, Engineering Sciences (FEE)
Jeremy Frey
Professor, Chemistry (FNES)
Lindy Holden-Dye
Professor, Biological Sciences (FNES)
Ian Sinclair
Professor, Engineering Sciences (FEE)
Mark Spearing
Professor, Engineering Sciences (FEE)
Mark Taylor
Professor, Engineering Sciences (FEE)
Vincent O'Connor
Reader, Biological Sciences (FNES)
Tiina Roose
Reader, Engineering Sciences (FEE)
John Chad
Senior Lecturer, Biological Sciences (FNES)
Richard Edwards
Senior Lecturer, Biological Sciences (FNES)
Neil Broderick
Lecturer, Optoelectronics Research Centre
Philipp Thurner
Lecturer, Engineering Sciences (FEE)
Thomas Blumensath
Senior Research Fellow, Institute of Sound & Vibration Research (FEE)
Philip Williamson
Senior Research Fellow, Biological Sciences (FNES)
Richard Boardman
Research Fellow, Engineering Sciences (FEE)
Dmitry Grinev
Research Fellow, Engineering Sciences (FEE)
Rob Mills
Research Fellow, Electronics and Computer Science (FPAS)
Jordi Arranz
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Alicia Costalago Meruelo
Postgraduate Research Student, University of Southampton
Stuart George
Postgraduate Research Student, Mathematics (FSHS)
Ben Ient
Postgraduate Research Student, Biological Sciences (FNES)
Gwen Palmer
Postgraduate Research Student, Engineering Sciences (FEE)
Pegah Tayaranian Hosseini
Postgraduate Research Student, Institute of Sound & Vibration Research (FEE)
Matthew Higgins
Undergraduate Research Student, Biological Sciences (FNES)
Elena Vataga
Technical Staff, iSolutions
Petrina Butler
Administrative Staff, Research and Innovation Services
Kenji Takeda
Alumnus, Engineering Sciences (FEE)