Computational Modelling Group

Java

Java is an object-oriented programming language originally developed by Sun Microsystems. Through the use of a "virtual machine" approach, Java allows programs written on one computing architecture (e.g., Linux) to be run on another (e.g., Windows). Java also has a relatively simple and clean syntax and has been a popular language on introductory programming courses.

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Projects

Adding social ties to the Schelling model

Seth Bullock, Sally Brailsford (Investigators), Elisabeth zu-Erbach-Schoenberg

The Schelling model is an abstract model for segregation in
a spatially arranged population. We extended the traditional model by the addition of a dynamic social network. The social network influences the spatial dynamics of agents moving on the grid by changing the agents’ evaluation of their neighbourhood. In turn, the spatial arrangement influences the change of the social network.

An Investigation into the Cascade Effect of Mergers on the Global Financial Markets

Seth Bullock, Antonella Ianni (Investigators), Camillia Zedan

An investigation into the external effects that horizontal mergers have on the interconnected global markets.

Control and Prediction of the Organic Solid State

Richard Boardman

This project aims to produce a computer technology for the prediction of the crystal structure(s) of an organic molecule, that could be used even prior to the synthesis of the compound.

Such a computational study could be done relatively quickly to predict the dangers and opportunities of the solid phases of a molecule under development. Our project will develop the methods of experimental screening for polymorphs and their characterisation, and hence the combination will provide a major new technology for aiding industrial formulation.

Fracturing of small social networks

Seth Bullock, Sally Brailsford (Investigators), Elisabeth zu-Erbach-Schoenberg

A connected social network is a very important factor for the success of groups and organisations. We investigate which factors make a group more resistant to the effects of disagreements which commonly happen in small social networks.

Generic Operational Simulation of Civil Unmanned Air Vehicle Operations

Kenji Takeda, James Scanlan (Investigators)

This project creates a generic operational simulation of Unmanned Air Vehicle Operations. UAVs can be valued for their mission-suitability and compared against various configurations.

Integrated in silico prediction of protein-protein interaction motifs

Richard Edwards (Investigator), Nicolas Palopoli, Kieren Lythgow

Many vital protein-protein interactions are mediated by Short Linear Motifs (SLiMs) which are short proteins typically 5-15 amino acids long containing only a few positions crucial to function. This project integrates a number of leading computational techniques to predict novel SLiMs and add crucial detail to protein-protein interaction networks.

Modelling Macro-Nutrient Release & Fate Resulting from Sediment Resuspension in Shelf Seas

Chris Wood

This study involves adapting a previously-published model to take into account the effect resuspension events (both natural and anthropogenic) may have on nutrient dynamics at the sediment-water interface, and hence produce better estimates for the total nutrient budgets for shelf seas.

Multi-objective design optimisation of coronary stents

Neil Bressloff, Georges Limbert (Investigators), Sanjay Pant

Stents are tubular type scaffolds that are deployed (using an inflatable balloon on a catheter), most commonly to recover the shape of narrowed (diseased) arterial segments. Despite the widespread clinical use of stents in cardiovascular intervention, the presence of such devices can cause adverse responses leading to fatality or to the need for further treatment. The most common unwanted responses of inflammation are in-stent restenosis and thrombosis. Such adverse biological responses in a stented artery are influenced by many factors, including the design of the stent. This project aims at using multi-objective optimisation techniques to find an optimum family of coronary stents which are more resistant to the processes of in-stent restenosis (IR) and stent thrombosis (ST).

Network Analysis of Roman Transport Routes in the Imperial Roman Mediterranean

David Potts

This research is designed to explore the nature of the relationships between Portus, Rome, and other selected ports in the Mediterranean and to establish patterns and the changing nature of trading networks derived from the distribution of known Roman artefacts.

Operational Simulation of the Solent Search-and-Rescue environment

James Scanlan, Kenji Takeda, Hans Fangohr (Investigators), Ben Schumann

This project aims to identify useful metrics for a proposed Search-and-Rescue UAV and test it virtually in a realistic environment.

Reconstructing past lake conditions using sediment cores

Seth Bullock

Lake sediments can be analysed for the reconstruction of past environmental conditions, and past abundances of different species. These data are the first step in the creation of a simulation model which will investigate the dramatic fluctuations in environmental conditions in the East African Rift Valley soda lakes.

Separation of timescales in models of complex networks

Seth Bullock (Investigator), Elisabeth zu-Erbach-Schoenberg, Connor McCabe

In many real-world systems several processes act on the system state. The way these processes interact can have implications for the resulting system state. We investigate how separation of the timescales of two processes influences the system's equilibrium state.

Simulation modelling of habitat permeability for mammalian wildlife

Patrick Doncaster, Jason Noble (Investigators), Angela Watkins

Using and integrating least-cost models and agent-based simulations to explore the way in which mammals interact with, and hence move, through fragmented landscapes.

Spatial Mobility in the Formation of Agent-Based Economic Networks

Antonella Ianni, Seth Bullock (Investigators), Camillia Zedan

An investigation into the effect of spatial mobility on endogenous economic network formation.

The Endogenous Formation of Economic Networks

Antonella Ianni, Seth Bullock (Investigators), Camillia Zedan

An investigation into endogenous network formation using a simple agent-based approach.

The Role of Information in Price Discovery

Antonella Ianni, Seth Bullock (Investigators), Camillia Zedan

The recent economic crisis has highlighted a continued vulnerability and lack of understanding in the financial markets. In order to overcome this, many believe that current market models must be improved. Recently, a trend towards agent-based modelling has emerged. Viewing the economy as a complex system is beginning to be seen as key to explaining certain market characteristics that were originally considered anomalies.

One of the fundamental assumptions in economics is that of information efficiency: that the price of a stock reflects its worth, that all possible information about a security is publicly known, and that any changes to price take place instantaneously. In reality, however, this is not the case.

This project considers the use of agents in modelling economic systems and demonstrates the effect of information levels on price discovery using a simple market simulation.

µ-VIS Computed Tomography Centre

Ian Sinclair, Richard Boardman, Dmitry Grinev, Philipp Thurner, Simon Cox, Jeremy Frey, Mark Spearing, Kenji Takeda (Investigators)

A dedicated centre for computed tomography (CT) at Southampton, providing complete support for 3D imaging science, serving Engineering, Biomedical, Environmental and Archaeological Sciences. The centre encompasses five complementary scanning systems supporting resolutions down to 200nm and imaging volumes in excess of one metre: from a matchstick to a tree trunk, from an ant's wing to a gas turbine blade.

People

Sally Brailsford
Professor, Management (FBL)
Seth Bullock
Professor, Electronics and Computer Science (FPAS)
Andrew Collins
Professor, Medicine (FM)
Simon Cox
Professor, Engineering Sciences (FEE)
Hans Fangohr
Professor, Engineering Sciences (FEE)
Jeremy Frey
Professor, Chemistry (FNES)
James Scanlan
Professor, Engineering Sciences (FEE)
Ian Sinclair
Professor, Engineering Sciences (FEE)
Mark Spearing
Professor, Engineering Sciences (FEE)
Patrick Doncaster
Reader, Biological Sciences (FNES)
Neil Bressloff
Senior Lecturer, Engineering Sciences (FEE)
Richard Edwards
Senior Lecturer, Biological Sciences (FNES)
Antonella Ianni
Senior Lecturer, Social Sciences (FSHS)
Denis Kramer
Lecturer, Engineering Sciences (FEE)
Georges Limbert
Lecturer, Engineering Sciences (FEE)
Philipp Thurner
Lecturer, Engineering Sciences (FEE)
Richard Boardman
Research Fellow, Engineering Sciences (FEE)
Jane Gibson
Research Fellow, Medicine (FM)
Dmitry Grinev
Research Fellow, Engineering Sciences (FEE)
Gunnar Mallon
Research Fellow, Geography (FSHS)
Jason Noble
Research Fellow, Electronics and Computer Science (FPAS)
Nicolas Palopoli
Research Fellow, Biological Sciences (FNES)
Jordi Arranz
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Caroline Duignan
Postgraduate Research Student, Biological Sciences (FNES)
Tom Hebbron
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Leo Jofeh
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Kondwani Kanjere
Postgraduate Research Student, Engineering Sciences (FEE)
Connor McCabe
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Sanjay Pant
Postgraduate Research Student, Engineering Sciences (FEE)
David Potts
Postgraduate Research Student, Humanities (FH)
Alvaro Ruiz-Serrano
Postgraduate Research Student, Chemistry (FNES)
Ben Schumann
Postgraduate Research Student, Engineering Sciences (FEE)
Jacob Selmes
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Angela Watkins
Postgraduate Research Student, Biological Sciences (FNES)
Iain Weaver
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Robin Wilson
Postgraduate Research Student, Geography (FSHS)
Chris Wood
Postgraduate Research Student, Ocean & Earth Science (FNES)
Camillia Zedan
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Davide Zilli
Postgraduate Research Student, Electronics and Computer Science (FPAS)
Elisabeth zu-Erbach-Schoenberg
Postgraduate Research Student, Management (FBL)
Jessica Jones
Technical Staff, iSolutions
Elena Vataga
Technical Staff, iSolutions
Petrina Butler
Administrative Staff, Research and Innovation Services
Kieren Lythgow
Alumnus, Health Protection Agency
Mohsen Mesgarpour
Alumnus, University of Southampton
Kenji Takeda
Alumnus, Engineering Sciences (FEE)
Daniel Pope
External Member, Mauve Internet Ltd.